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    si:ch73-281i18.6 si:ch73-281i18.6 [ Danio rerio (zebrafish) ]

    Gene ID: 100330842, updated on 27-Mar-2024

    Summary

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    Official Symbol
    si:ch73-281i18.6provided by ZNC
    Official Full Name
    si:ch73-281i18.6provided by ZNC
    Primary source
    ZFIN:ZDB-GENE-141219-21
    See related
    Ensembl:ENSDARG00000101490 AllianceGenome:ZFIN:ZDB-GENE-141219-21
    Gene type
    protein coding
    RefSeq status
    MODEL
    Organism
    Danio rerio
    Lineage
    Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Actinopterygii; Neopterygii; Teleostei; Ostariophysi; Cypriniformes; Danionidae; Danioninae; Danio
    Summary
    Predicted to be involved in microtubule cytoskeleton organization. Predicted to be active in microtubule cytoskeleton. [provided by Alliance of Genome Resources, Apr 2022]
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    Genomic context

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    Location:
    chromosome: 19
    Exon count:
    7
    Annotation release Status Assembly Chr Location
    106 current GRCz11 (GCF_000002035.6) 19 NC_007130.7 (3919379..3925794, complement)
    105 previous assembly GRCz10 (GCF_000002035.5) 19 NC_007130.6 (3988553..3994974, complement)

    Chromosome 19 - NC_007130.7Genomic Context describing neighboring genes Neighboring gene si:ch73-281i18.4 Neighboring gene si:ch73-281i18.7 Neighboring gene MAP7 domain containing 1b Neighboring gene uncharacterized LOC100149327 Neighboring gene sperm-tail PG-rich repeat containing 1

    Genomic regions, transcripts, and products

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    Go to nucleotide: Graphics FASTA GenBank

    Expression

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    • Project title: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • Description: Sequencing the Zebrafish transcriptome from a range of tissues and developmental stages
    • BioProject: PRJEB1986
    • Analysis date: Fri Dec 8 19:48:10 2017

    Bibliography

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    Related articles in PubMed

    1. Phylogenetic-based propagation of functional annotations within the Gene Ontology consortium. Gaudet P, et al. Brief Bioinform, 2011 Sep. PMID 21873635, Free PMC Article

    GeneRIFs: Gene References Into Functions

    General gene information

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    Homology

    Gene Ontology Provided by ZFIN

    Process Evidence Code Pubs
    acts_upstream_of_or_within microtubule cytoskeleton organization IEA
    Inferred from Electronic Annotation
    more info
    		  
    Component Evidence Code Pubs
    located_in microtubule cytoskeleton IEA
    Inferred from Electronic Annotation
    more info
    		  

    General protein information

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    Preferred Names
    ensconsin-like

    NCBI Reference Sequences (RefSeq)

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    RefSeqs of Annotated Genomes: Danio rerio Annotation Release 106 details...Open this link in a new tab

    The following sections contain reference sequences that belong to a specific genome build. Explain

    Reference GRCz11 Primary Assembly

    Genomic

    1. NC_007130.7 Reference GRCz11 Primary Assembly

      Range
      3919379..3925794 complement
      Download
      GenBank, FASTA, Sequence Viewer (Graphics)

    mRNA and Protein(s)

    1. XM_002661016.5 → XP_002661062.1  ensconsin-like

      UniProtKB/TrEMBL
      A0A0R4IQV6, A0A8M1RLP1
      Related
      ENSDARP00000138874.1, ENSDART00000163138.2
      Conserved Domains (1) summary
      pfam05672
      Location:8 → 61
      MAP7; MAP7 (E-MAP-115) family
    Nucleotide Protein Strain
    Heading Accession and Version

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